Access or assign capture codes — capture

This function can used to access or assign the capture codes contained within the sefraData object.

Usage

capture_codes(object, ...)

# S4 method for class 'sefraData'
capture_codes(object)

capture_codes(object, ...) <- value

# S4 method for class 'sefraData,character'
capture_codes(object) <- value

# S4 method for class 'sefraData,data.frame'
capture_codes(object) <- value

# S4 method for class 'sefraData'
species_names(object)

Arguments

object: a sefraData class object.
...: additional arguments to the generic function (not used).
value: a character vector or data frame containing capture codes.

Note

Capture codes (function argument value) should match those listed in codes. If not, then the function will return an error.

Examples

# assign character vector
dat <- sefraData(c('DIW', 'DQS', 'TWD'))
#> species codes input: including all species-dependent capture codes
#> constructed 'sefraData' object
capture_codes(dat) <- c('BLZ')
capture_codes(dat)
#> 1 capture code:
#> (empty captures data frame)
#>    code id_code resolution id_resolution
#> 1   BLZ      40    species             1
#> 2   BLZ      40    species             1
#> 3   BLZ      40    species             1
#> 4   BLZ      40    complex             2
#> 5   BLZ      40    complex             2
#> 6   BLZ      40    complex             2
#> 7   BLZ      40      genus             3
#> 8   BLZ      40      genus             3
#> 9   BLZ      40     family             4
#> 10  BLZ      40      class             5